| Taxon | rbcL | 18S | 28S | other |
| Nephroselmis olivacea | GenBank | GenBank |   |   |
| Micromonas pusilla | GenBank | LG |   |   |
| Mantoniella squamata | GenBank | GenBank |   |   |
| Mesostigma viridis | GenBank |   |   | actin |
| Pterosperma cristatum | GenBank | MWF |   | centrin |
| Tasmanites |   |   |   |   |
| Pedinomonas sp. | GenBank | GenBank | GenBank | 5S, others |
| Resultor mikron | GenBank |   |   |   |
| Scourfieldia sp. |   |   |   |   |
| Pseudoscourfieldia marina | GenBank | MWF |   |   |
| Pyramimonas orientalis | GenBank |   |   |   |
| Pyramimonas olivacea | GenBank |   |   |   |
| Pyramimonas subgenus3 | GenBank |   |   |   |
| Mamiella sp. | GenBank |   |   |   |
| Bathycoccus prasinos | GenBank | LG |   |   |
| Pycnococcus provasolii | GenBank | MWF |   | RNA poly |
| Prasinococcus sp. |   | MWF |   |   |
| Prasinoderma sp. |   | MWF |   |   |
| Ostreococcus taurii |   | GenBank |   |   |
| Scherffelia dubia |   | GenBank |   | centrin, actin |
| Tetraselmis spp. | GenBank | GenBank |   | centrin, 5S |
| Cymbomonas tetramitiformis. | GenBank |   |   |   |